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@lkstrp lkstrp commented Nov 3, 2025

Changes proposed in this Pull Request

The full snakemake config is currently saved in n.meta. This PR moves it instead to n.meta['snakemake_config']. I want to add additional metadata to the Network to use somewhere else, so having it's own key is more organised.

But this is breaking if people rely on it somewhere.

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fneum commented Nov 3, 2025

Probably wise, but I definitely have used n.meta for accessing snakemake configuration options in post-processing scripts in the past. It's only a mild annoyance. Just add a note in release notes.

@fneum fneum added this to the v2025.11.0 milestone Nov 5, 2025
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2 participants