Point at Quinine fixes for issues 34/35 (resolves BD2KGenomics#157)

Picks up:

* bigdatagenomics/quinine@a5cb6b0,
  fix for bigdatagenomics/quinine#34
* bigdatagenomics/quinine@be8a1b6,
  fix for bigdatagenomics/quinine#35,
* Merge commit bigdatagenomics/quinine@2475aea
* Force pushed update BD2KGenomics/toil-scripts@eed1ef8
  to BD2KGenomics/toil-scripts#381.

Author: fnothaft

quinine/Makefile

@@ -7,7 +7,7 @@ build_tool = runtime-container.DONE
 build_number ?= none
 git_commit ?= $(shell git rev-parse HEAD)
 name = quay.io/ucsc_cgl/quinine
-tag = 65bdfae289e2be6874108923e08ce073ce090a8e--${git_commit}
+tag = 2475aea0f800ce293dbf18e743c500a0cd51e403--${git_commit}
 
 # Steps
 build: ${build_output} ${build_tool}

quinine/build/Dockerfile

@@ -9,6 +9,6 @@ RUN git clone https://github.com/bigdatagenomics/quinine.git
 
 # build quinine
 WORKDIR /home/quinine
-RUN git checkout 65bdfae289e2be6874108923e08ce073ce090a8e
+RUN git checkout 2475aea0f800ce293dbf18e743c500a0cd51e403
 
 RUN /opt/apache-maven-3.3.9/bin/mvn package -DskipTests