Enhance package analysis features and documentation

README.md

@@ -22,6 +22,9 @@ NetContextServer empowers AI coding assistants like Cursor AI to deeply understa
 - 🛡️ **Built-in Security**: Safe file access with automatic protection of sensitive data
 - 🚀 **Cursor AI Integration**: Seamless setup with Cursor AI for enhanced coding assistance
 - 📦 **Package Analysis**: Understand your dependencies and get update recommendations
+  - 🔍 **Deep Dependency Visualization**: See transitive dependencies with interactive, color-coded graphs
+  - 🧩 **Smart Grouping**: Visually group related packages for easier navigation
+  - 📊 **Update Recommendations**: Identify outdated packages and security issues
 - ⚡ **Fast & Efficient**: Quick indexing and response times for large codebases
 
 ## 🚀 Quick Start
@@ -148,9 +151,34 @@ dotnet run --project src/NetContextClient/NetContextClient.csproj -- list-source
 
 5. **Analyze Packages**:
 ```bash
+# Set your base directory first
+dotnet run --project src/NetContextClient/NetContextClient.csproj -- set-base-dir --directory "path/to/your/project"
+
+# Run the package analysis
 dotnet run --project src/NetContextClient/NetContextClient.csproj -- analyze-packages
 ```
 
+Example output:
+```
+Project: MyProject.csproj
+  Found 2 package(s):
+  - ✅ Newtonsoft.Json (13.0.1)
+    Used in 5 location(s)
+
+    Dependencies:
+    └─ Newtonsoft.Json
+       └─ System.*
+          └─ System.ComponentModel
+
+  - 🔄 Microsoft.Extensions.DependencyInjection (5.0.2 → 6.0.1)
+    Update available: 6.0.1
+
+    Dependencies:
+    └─ Microsoft.Extensions.DependencyInjection
+       └─ Microsoft.*
+          └─ Microsoft.Extensions.DependencyInjection.Abstractions
+```
+
 ### Search Commands
 
 1. **Text Search**:
@@ -235,7 +263,12 @@ dotnet run --project src/NetContextClient/NetContextClient.csproj -- add-ignore-
 dotnet run --project src/NetContextClient/NetContextClient.csproj -- list-projects-in-dir --directory "D:\Projects\MyApp\src"
 ```
 
-4. Search for authentication-related code:
+4. Analyze your project's package dependencies:
+```bash
+dotnet run --project src/NetContextClient/NetContextClient.csproj -- analyze-packages
+```
+
+5. Search for authentication-related code:
 ```bash
 dotnet run --project src/NetContextClient/NetContextClient.csproj -- semantic-search --query "user authentication and authorization logic"
 ```

docs/getting-started.md

@@ -97,6 +97,22 @@ dotnet run --project src/NetContextClient/NetContextClient.csproj -- search-code
 dotnet run --project src/NetContextClient/NetContextClient.csproj -- semantic-search --query "how is user data validated"
 ```
 
+### Package Analysis
+```bash
+# First set your base directory
+dotnet run --project src/NetContextClient/NetContextClient.csproj -- set-base-dir --directory "path/to/your/project"
+
+# Analyze packages across all projects
+dotnet run --project src/NetContextClient/NetContextClient.csproj -- analyze-packages
+```
+
+The package analysis provides:
+- Visualization of transitive dependencies with color-coded graphs
+- Detection of unused packages (⚠️) and available updates (🔄)
+- Security vulnerability warnings (🔴)
+- Smart grouping of related packages by namespace
+- Recommendations for package maintenance
+
 ### Security Management
 ```bash
 # Add files to ignore

docs/tool-reference.md

@@ -136,8 +136,48 @@ dotnet run --project src/NetContextClient/NetContextClient.csproj -- analyze-pac
 
 **Output includes:**
 - Package versions and available updates
-- Usage analysis
+- Usage analysis and detection of unused packages
+- Security vulnerability warnings
 - Recommendations for updates or removal
+- Deep transitive dependency analysis
+- Visual dependency graph representation with smart grouping
+
+**Dependency Graph Features:**
+- Hierarchical tree visualization in ASCII-art format
+- Automatic grouping of related dependencies by namespace
+- Color-coding of dependencies in the console:
+  - Cyan: Leaf dependencies (end nodes)
+  - Green: Intermediate dependencies
+  - Yellow: Grouped namespaces
+- Clear visual separation between dependency groups
+- Configurable depth of transitive dependency resolution
+
+**Example Output:**
+```
+Project: MyProject.csproj
+  Found 3 package(s):
+  - ✅ Newtonsoft.Json (13.0.1)
+    Used in 5 location(s)
+
+    Dependencies:
+    └─ Newtonsoft.Json
+       ├─ Microsoft.*
+       │  └─ Microsoft.CSharp
+       └─ System.*
+          └─ System.ComponentModel
+
+  - 🔄 Microsoft.Extensions.DependencyInjection (5.0.2 → 6.0.1)
+    Update available: 6.0.1
+    Used in 3 location(s)
+
+    Dependencies:
+    └─ Microsoft.Extensions.DependencyInjection
+       └─ Microsoft.*
+          └─ Microsoft.Extensions.DependencyInjection.Abstractions
+
+  - ⚠️ Unused.Package (1.0.0)
+    Consider removing this unused package
+```
 
 ## Ignore Pattern Management
 

src/NetContextClient/Models/PackageAnalysis.cs

@@ -49,4 +49,9 @@ public class PackageAnalysis
     /// Gets or sets the list of packages that depend on this package.
     /// </summary>
     public List<string> TransitiveDependencies { get; set; } = [];
+
+    /// <summary>
+    /// Gets or sets a visual representation of the dependency graph as ASCII art.
+    /// </summary>
+    public string? DependencyGraph { get; set; }
 } 

src/NetContextClient/Program.cs

@@ -651,6 +651,40 @@ static async Task<int> Main(string[] args)
                                 {
                                     await Console.Out.WriteLineAsync($"    Used in {package.UsageLocations.Count} location(s)");
                                 }
+
+                                // Display dependency graph if available
+                                if (!string.IsNullOrEmpty(package.DependencyGraph))
+                                {
+                                    await Console.Out.WriteLineAsync("\n    Dependencies:");
+                                    var lines = package.DependencyGraph.Split(Environment.NewLine);
+                                    foreach (var line in lines)
+                                    {
+                                        // Color code the dependency graph
+                                        string coloredLine = line;
+                                        if (line.Contains("└─"))
+                                        {
+                                            // Last items in their branch
+                                            coloredLine = $"\u001b[36m{line}\u001b[0m"; // Cyan
+                                        }
+                                        else if (line.Contains("├─"))
+                                        {
+                                            // Middle items
+                                            coloredLine = $"\u001b[32m{line}\u001b[0m"; // Green
+                                        }
+                                        else if (line.Contains(".*"))
+                                        {
+                                            // Group headers
+                                            coloredLine = $"\u001b[33m{line}\u001b[0m"; // Yellow
+                                        }
+
+                                        await Console.Out.WriteLineAsync($"    {coloredLine}");
+                                    }
+                                    await Console.Out.WriteLineAsync();
+                                }
+                                else if (package.TransitiveDependencies.Count > 0)
+                                {
+                                    await Console.Out.WriteLineAsync($"    Has {package.TransitiveDependencies.Count} transitive dependencies");
+                                }
                             }
 
                             await Console.Out.WriteLineAsync();

src/NetContextServer/Models/PackageAnalysis.cs

@@ -49,4 +49,9 @@ public class PackageAnalysis
     /// Gets or sets the recommended action to take regarding this package (e.g., update, remove, etc.).
     /// </summary>
     public string? RecommendedAction { get; set; }
+
+    /// <summary>
+    /// Gets or sets a visual representation of the dependency graph as ASCII art.
+    /// </summary>
+    public string? DependencyGraph { get; set; }
 }

src/NetContextServer/Services/PackageAnalyzerService.cs

@@ -93,6 +93,49 @@ public async Task<PackageAnalysis> AnalyzePackageAsync(PackageReference package)
                     analysis.LatestVersion = latestVersion.ToString();
                 }
             }
+
+            // Resolve transitive dependencies
+            try
+            {
+                var dependencyResource = await NuGetRepository.GetResourceAsync<DependencyInfoResource>();
+                var packageDependencyInfo = await dependencyResource.ResolvePackage(
+                    new NuGet.Packaging.Core.PackageIdentity(package.Id, currentVersion),
+                    NuGet.Frameworks.NuGetFramework.ParseFolder("net6.0"),
+                    Cache,
+                    NullLogger.Instance,
+                    CancellationToken.None);
+
+                if (packageDependencyInfo != null)
+                {
+                    var dependencies = new List<string>();
+                    var visited = new HashSet<string>();
+
+                    // Start with the direct dependencies
+                    foreach (var dependency in packageDependencyInfo.Dependencies)
+                    {
+                        if (!visited.Contains(dependency.Id))
+                        {
+                            visited.Add(dependency.Id);
+                            dependencies.Add(dependency.Id);
+
+                            // Recursively gather deeper dependencies
+                            await GatherDependenciesForPackageAsync(
+                                dependency.Id, 
+                                dependency.VersionRange.MinVersion ?? NuGetVersion.Parse("0.0.1"), 
+                                dependencies, 
+                                visited, 
+                                1, 
+                                3);
+                        }
+                    }
+
+                    analysis.TransitiveDependencies = dependencies;
+                }
+            }
+            catch (Exception ex)
+            {
+                Console.WriteLine($"Error resolving dependencies for {package.Id}: {ex.Message}");
+            }
 
             // Check usage
             try
@@ -156,4 +199,46 @@ public async Task<PackageAnalysis> AnalyzePackageAsync(PackageReference package)
 
         return analysis;
     }
+
+    private async Task GatherDependenciesForPackageAsync(string packageId, NuGetVersion packageVersion, List<string> dependencies, HashSet<string> visited, int currentDepth, int maxDepth)
+    {
+        if (currentDepth > maxDepth) return;
+        if (visited.Contains(packageId)) return;
+        visited.Add(packageId);
+
+        dependencies.Add(packageId);
+
+        try
+        {
+            var dependencyResource = await NuGetRepository.GetResourceAsync<DependencyInfoResource>();
+            var dependencyInfo = await dependencyResource.ResolvePackage(
+                new NuGet.Packaging.Core.PackageIdentity(packageId, packageVersion),
+                NuGet.Frameworks.NuGetFramework.ParseFolder("net6.0"),
+                Cache,
+                NullLogger.Instance,
+                CancellationToken.None);
+
+            if (dependencyInfo != null)
+            {
+                foreach (var childDependency in dependencyInfo.Dependencies)
+                {
+                    if (!visited.Contains(childDependency.Id))
+                    {
+                        var minVersion = childDependency.VersionRange.MinVersion ?? NuGetVersion.Parse("0.0.1");
+                        await GatherDependenciesForPackageAsync(
+                            childDependency.Id, 
+                            minVersion, 
+                            dependencies, 
+                            visited, 
+                            currentDepth + 1, 
+                            maxDepth);
+                    }
+                }
+            }
+        }
+        catch (Exception ex)
+        {
+            Console.WriteLine($"Error gathering dependencies for {packageId}: {ex.Message}");
+        }
+    }
 }